Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm8908-201ENSMUST00000121633 1024 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm15547-201ENSMUST00000122152 333 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm6309-201ENSMUST00000174320 1154 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm27046-201ENSMUST00000182160 463 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm45338-203ENSMUST00000210371 1009 ntTSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 CT009718.3-201ENSMUST00000221116 367 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Poc1b-203ENSMUST00000159228 1799 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Gm44775-201ENSMUST00000207266 1456 ntBASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Hfm1D3Z4R1 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Gm44405-201ENSMUST00000198952 126 ntBASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Hfm1D3Z4R1 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Hfm1D3Z4R1 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Osgepl1-201ENSMUST00000027265 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Phgdh-ps1-201ENSMUST00000207540 754 ntBASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Gm14267-206ENSMUST00000226870 1209 ntBASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Gm37297-201ENSMUST00000192974 2384 ntBASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Gm37737-201ENSMUST00000195013 1638 ntBASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Hfm1D3Z4R1 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm11331-201ENSMUST00000119764 288 ntBASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm14704-201ENSMUST00000120300 874 ntBASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm15782-201ENSMUST00000121073 445 ntBASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Gm28450-201ENSMUST00000187349 638 ntBASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 AC166051.1-201ENSMUST00000214313 210 ntBASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Hfm1D3Z4R1 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms