Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Tmf1B9EKI3 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm5687-201ENSMUST00000118252 640 ntBASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Mir1894-201ENSMUST00000122802 81 ntBASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm17794-201ENSMUST00000220252 955 ntBASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm18473-201ENSMUST00000220543 868 ntBASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Tmf1B9EKI3 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Dennd4c-201ENSMUST00000045512 5648 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Tmf1B9EKI3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Gm13612-201ENSMUST00000119276 390 ntBASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Gm8131-201ENSMUST00000213783 1570 ntBASIC18.36■□□□□ 0.53
Tmf1B9EKI3 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Tmf1B9EKI3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Tmf1B9EKI3 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Tmf1B9EKI3 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms