Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc22a28B2RT89 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Mir874-201ENSMUST00000104769 76 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm25144-201ENSMUST00000179561 110 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm25352-201ENSMUST00000179815 110 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Shd-206ENSMUST00000225145 998 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Rnf19b-202ENSMUST00000097874 1992 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Slc22a28B2RT89 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm5648-201ENSMUST00000122244 1587 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm6912-201ENSMUST00000117218 544 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm15678-201ENSMUST00000117573 960 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm6415-201ENSMUST00000118488 348 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc22a28B2RT89 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Slc22a28B2RT89 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms