Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC11□□□□□ -0.65
Gm12887B1AVM1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC11□□□□□ -0.65
Gm12887B1AVM1 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm27628-201ENSMUST00000184911 107 ntBASIC11□□□□□ -0.65
Gm12887B1AVM1 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gm15590-201ENSMUST00000078419 552 ntBASIC11□□□□□ -0.65
Gm12887B1AVM1 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Gm12887B1AVM1 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11□□□□□ -0.65
Gm12887B1AVM1 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Satb2-202ENSMUST00000114415 5805 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 AA543401-201ENSMUST00000164248 1269 ntBASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm28033-201ENSMUST00000184224 96 ntBASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm42480-201ENSMUST00000198434 2595 ntBASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm4782-201ENSMUST00000168705 2046 ntBASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Gm12887B1AVM1 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Gm12887B1AVM1 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 64.5 ms