Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm14350-201ENSMUST00000116642 640 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm16271-201ENSMUST00000162837 220 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm29608-201ENSMUST00000190444 463 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm42518-201ENSMUST00000196277 938 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 AC161537.1-201ENSMUST00000226199 1015 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gm10076-201ENSMUST00000073238 384 ntBASIC10.91□□□□□ -0.66
Chd6A3KFM7 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Chd6A3KFM7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm9347-201ENSMUST00000211473 1607 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm13022-201ENSMUST00000121181 285 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm15891-201ENSMUST00000127307 611 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 C330019F10Rik-201ENSMUST00000149428 459 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm18630-201ENSMUST00000222109 1397 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm11930-201ENSMUST00000117788 190 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm11450-201ENSMUST00000121144 333 ntBASIC10.9□□□□□ -0.66
Chd6A3KFM7 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Chd6A3KFM7 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC10.9□□□□□ -0.66
Chd6A3KFM7 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC10.9□□□□□ -0.67
Chd6A3KFM7 Gm43697-201ENSMUST00000199637 2581 ntBASIC10.9□□□□□ -0.67
Chd6A3KFM7 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd6A3KFM7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Chd6A3KFM7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm6506-201ENSMUST00000119775 1136 ntBASIC10.89□□□□□ -0.67
Chd6A3KFM7 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm19091-201ENSMUST00000208120 978 ntBASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Chd6A3KFM7 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 56.6 ms