Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm15824-201ENSMUST00000119516 955 ntBASIC14.18□□□□□ -0.14
Scn1aA2APX8 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm7029-201ENSMUST00000173226 450 ntBASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm4271-201ENSMUST00000174444 973 ntBASIC14.18□□□□□ -0.14
Scn1aA2APX8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm7561-201ENSMUST00000211203 886 ntBASIC14.18□□□□□ -0.14
Scn1aA2APX8 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1aA2APX8 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn1aA2APX8 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC14.17□□□□□ -0.14
Scn1aA2APX8 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 C330013E15Rik-201ENSMUST00000181034 878 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.17□□□□□ -0.14
Scn1aA2APX8 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.17□□□□□ -0.14
Scn1aA2APX8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC14.17□□□□□ -0.14
Scn1aA2APX8 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.17□□□□□ -0.14
Scn1aA2APX8 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn1aA2APX8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.16□□□□□ -0.14
Scn1aA2APX8 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Matn2-206ENSMUST00000228570 2798 ntBASIC14.16□□□□□ -0.14
Scn1aA2APX8 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Snora78-201ENSMUST00000158630 128 ntBASIC14.16□□□□□ -0.14
Scn1aA2APX8 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm27847-201ENSMUST00000183711 107 ntBASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm27375-201ENSMUST00000183799 107 ntBASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn1aA2APX8 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms