Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Ccdc112A0AUP1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm4804-201ENSMUST00000182234 999 ntBASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 AC168058.1-201ENSMUST00000219521 2282 ntBASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Ccdc112A0AUP1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm44891-201ENSMUST00000208817 2223 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 AC151286.1-201ENSMUST00000198489 145 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm46209-201ENSMUST00000217912 553 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Ccdc112A0AUP1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Ccdc112A0AUP1 Gm15393-201ENSMUST00000120499 219 ntBASIC15.55■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms