Protein–RNA interactions for Protein: A0A075B6B2

Trav6n-6, T cell receptor alpha variable 6N-6 (Fragment), mousemouse

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-6A0A075B6B2 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm6973-201ENSMUST00000117080 721 ntBASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm13464-201ENSMUST00000119418 935 ntBASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm8584-201ENSMUST00000171982 758 ntBASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm9726-201ENSMUST00000180321 678 ntBASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 AC151286.1-201ENSMUST00000198489 145 ntBASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Gypa-201ENSMUST00000063359 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Trav6n-6A0A075B6B2 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm37269-201ENSMUST00000193906 1891 ntBASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm8749-201ENSMUST00000117737 331 ntBASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm26308-201ENSMUST00000157768 69 ntBASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
Trav6n-6A0A075B6B2 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Trav6n-6A0A075B6B2 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms