Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm15460-201ENSMUST00000118147 391 ntBASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm28630-201ENSMUST00000187806 498 ntBASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.17□□□□□ -0.62
Trav18A0A075B656 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm37644-201ENSMUST00000192190 2270 ntBASIC11.17□□□□□ -0.62
Trav18A0A075B656 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.17□□□□□ -0.62
Trav18A0A075B656 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav18A0A075B656 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gm25925-201ENSMUST00000158314 306 ntBASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gm18041-201ENSMUST00000218210 618 ntBASIC11.16□□□□□ -0.62
Trav18A0A075B656 AC166997.1-201ENSMUST00000225122 572 ntBASIC11.16□□□□□ -0.62
Trav18A0A075B656 AC156016.3-201ENSMUST00000228623 344 ntBASIC11.16□□□□□ -0.62
Trav18A0A075B656 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Trav18A0A075B656 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Trav18A0A075B656 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms