Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Wdfy1-205ENSMUST00000113513 4551 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Wdfy1-206ENSMUST00000113514 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Wdfy1-207ENSMUST00000113515 4551 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Ap3m2-201ENSMUST00000163739 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC10.29□□□□□ -0.76
Trav7n-4A0A075B620 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Gm29741-201ENSMUST00000192667 421 ntBASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 AC139350.3-201ENSMUST00000226151 420 ntBASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 CT025626.1-201ENSMUST00000223735 1455 ntBASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Paupar-201ENSMUST00000194826 3482 ntBASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Trav7n-4A0A075B620 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Gm8337-201ENSMUST00000187358 1938 ntBASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav7n-4A0A075B620 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Klk2-ps-201ENSMUST00000205342 571 ntBASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Grid1-201ENSMUST00000043349 5720 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav7n-4A0A075B620 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms