Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm4995-201ENSMUST00000117247 432 ntBASIC12.3□□□□□ -0.44
H2afb3S4R1G7 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm29541-201ENSMUST00000191351 678 ntBASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.3□□□□□ -0.44
H2afb3S4R1G7 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm24543-201ENSMUST00000103867 82 ntBASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm11594-201ENSMUST00000122313 162 ntBASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm6916-202ENSMUST00000205523 195 ntBASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm16476-201ENSMUST00000221544 139 ntBASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
H2afb3S4R1G7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm8410-201ENSMUST00000117225 605 ntBASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm14822-201ENSMUST00000122247 291 ntBASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm33320-201ENSMUST00000192232 530 ntBASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm2756-201ENSMUST00000195851 400 ntBASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
H2afb3S4R1G7 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.27□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms