Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Smarcb1Q9Z0H3 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Gm11803-201ENSMUST00000119966 444 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Snora78-201ENSMUST00000158630 128 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Gm8598-201ENSMUST00000221184 836 ntBASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Smarcb1Q9Z0H3 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Gm22331-201ENSMUST00000158066 136 ntBASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Proscos-202ENSMUST00000178990 666 ntBASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Smarcb1Q9Z0H3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms