Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.02■□□□□ -0
Prpf40aQ9R1C7 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Prpf40aQ9R1C7 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Prpf40aQ9R1C7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm37133-201ENSMUST00000192705 1922 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm24694-201ENSMUST00000180054 110 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm27663-201ENSMUST00000184839 110 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 AC166997.1-201ENSMUST00000225122 572 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm20445-201ENSMUST00000061905 565 ntBASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15□□□□□ -0.01
Prpf40aQ9R1C7 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms