Protein–RNA interactions for Protein: Q9R100

Cdh17, Cadherin-17, mousemouse

Predictions only

Length 827 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh17Q9R100 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm25948-201ENSMUST00000175334 112 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm5425-201ENSMUST00000214125 459 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 AC132104.2-201ENSMUST00000215011 266 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.31□□□□□ -0.28
Cdh17Q9R100 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Cdh17Q9R100 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm6912-201ENSMUST00000117218 544 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm12585-201ENSMUST00000117307 290 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm24420-201ENSMUST00000176676 59 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm3436-201ENSMUST00000179930 840 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm27680-201ENSMUST00000184192 160 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm27702-201ENSMUST00000184512 56 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm44344-201ENSMUST00000200287 129 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm14452-201ENSMUST00000118680 1632 ntBASIC13.3□□□□□ -0.28
Cdh17Q9R100 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cdh17Q9R100 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.29□□□□□ -0.28
Cdh17Q9R100 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cdh17Q9R100 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms