Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Upk3aQ9JKX8 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm16342-201ENSMUST00000124025 1025 ntBASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Upk3aQ9JKX8 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Gm38223-201ENSMUST00000194484 695 ntBASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Gm18018-201ENSMUST00000198273 408 ntBASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Matn2-206ENSMUST00000228570 2798 ntBASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.1□□□□□ -0.31
Upk3aQ9JKX8 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Upk3aQ9JKX8 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms