Protein–RNA interactions for Protein: Q9ER42

Barx1, Homeobox protein BarH-like 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Barx1Q9ER42 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Efs-202ENSMUST00000227037 2540 ntBASIC12.33□□□□□ -0.44
Barx1Q9ER42 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Barx1Q9ER42 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm13859-201ENSMUST00000119936 1423 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm23931-201ENSMUST00000103842 109 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm11803-201ENSMUST00000119966 444 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm16177-201ENSMUST00000120728 718 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm27243-201ENSMUST00000183964 521 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.32□□□□□ -0.44
Barx1Q9ER42 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Barx1Q9ER42 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.31□□□□□ -0.44
Barx1Q9ER42 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Men1-210ENSMUST00000166909 295 ntTSL 3 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Gm42627-201ENSMUST00000197347 224 ntBASIC12.31□□□□□ -0.44
Barx1Q9ER42 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.31□□□□□ -0.44
Barx1Q9ER42 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC12.31□□□□□ -0.44
Barx1Q9ER42 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Gm37297-201ENSMUST00000192974 2384 ntBASIC12.31□□□□□ -0.44
Barx1Q9ER42 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Barx1Q9ER42 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms