Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Gm27331-201ENSMUST00000183705 60 ntBASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Stag1Q9D3E6 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC16.21■□□□□ 0.19
Stag1Q9D3E6 1500009C09Rik-202ENSMUST00000143238 1552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Stag1Q9D3E6 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.18
Stag1Q9D3E6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.21■□□□□ 0.18
Stag1Q9D3E6 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Stag1Q9D3E6 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Gm45331-201ENSMUST00000209868 554 ntBASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Stag1Q9D3E6 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Gm23931-201ENSMUST00000103842 109 ntBASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Gm29705-201ENSMUST00000212598 474 ntBASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Stag1Q9D3E6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms