Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Gm12490-201ENSMUST00000120255 560 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Gm5745-201ENSMUST00000183748 313 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Ighv5-13-201ENSMUST00000193550 290 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Vps28Q9D1C8 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm43094-201ENSMUST00000196549 921 ntBASIC13.97□□□□□ -0.17
Vps28Q9D1C8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm9908-201ENSMUST00000211534 448 ntBASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm7653-201ENSMUST00000214567 508 ntBASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm30238-201ENSMUST00000195528 2603 ntBASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.97□□□□□ -0.17
Vps28Q9D1C8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.96□□□□□ -0.17
Vps28Q9D1C8 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Gm19078-201ENSMUST00000206311 727 ntBASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Vps28Q9D1C8 Gm18307-201ENSMUST00000206864 949 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms