Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Chaf1bQ9D0N7 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gm15427-201ENSMUST00000117288 531 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 AC174742.1-201ENSMUST00000218272 304 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Msrb2-201ENSMUST00000023856 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Chaf1bQ9D0N7 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 AA543401-201ENSMUST00000164248 1269 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm29310-201ENSMUST00000185468 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21825-201ENSMUST00000185728 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm29109-201ENSMUST00000185895 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21896-201ENSMUST00000186520 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21873-201ENSMUST00000186728 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21794-201ENSMUST00000187056 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21880-201ENSMUST00000187275 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21826-201ENSMUST00000187451 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21198-201ENSMUST00000188393 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21749-201ENSMUST00000189343 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21901-201ENSMUST00000189568 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm29424-201ENSMUST00000189716 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm28599-201ENSMUST00000189838 694 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21867-201ENSMUST00000189917 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm29269-201ENSMUST00000190087 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21722-201ENSMUST00000190153 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm28423-201ENSMUST00000190701 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21899-201ENSMUST00000190745 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21910-201ENSMUST00000191163 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21849-201ENSMUST00000191571 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm28678-201ENSMUST00000191593 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm20910-201ENSMUST00000193268 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm21871-201ENSMUST00000194621 696 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm5712-201ENSMUST00000199748 1043 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Gm20553-201ENSMUST00000204205 844 ntBASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Chaf1bQ9D0N7 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms