Protein–RNA interactions for Protein: Q9CYW4

Hdhd3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, mousemouse

Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdhd3Q9CYW4 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Plagl1-201ENSMUST00000121325 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Rpph1-201ENSMUST00000175096 319 ntBASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Hdhd3Q9CYW4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm12350-201ENSMUST00000121208 462 ntBASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm17971-201ENSMUST00000190239 806 ntBASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gm44608-201ENSMUST00000206827 855 ntBASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Hdhd3Q9CYW4 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Gm28659-201ENSMUST00000188013 759 ntBASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC11.06□□□□□ -0.64
Hdhd3Q9CYW4 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC11.06□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms