Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Gm28760-201ENSMUST00000185995 736 ntBASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Rpa3Q9CQ71 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm7730-201ENSMUST00000212486 454 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Gm43570-201ENSMUST00000199951 3688 ntBASIC14.42□□□□□ -0.1
Rpa3Q9CQ71 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Ntrk2-208ENSMUST00000225583 2719 ntBASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Rpa3Q9CQ71 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms