Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm25287-201ENSMUST00000103846 110 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm22918-201ENSMUST00000103855 110 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm25911-201ENSMUST00000157621 56 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm9824-201ENSMUST00000178707 561 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm29310-201ENSMUST00000185468 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21825-201ENSMUST00000185728 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm29109-201ENSMUST00000185895 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21896-201ENSMUST00000186520 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21873-201ENSMUST00000186728 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21794-201ENSMUST00000187056 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21880-201ENSMUST00000187275 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21826-201ENSMUST00000187451 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21198-201ENSMUST00000188393 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21749-201ENSMUST00000189343 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21901-201ENSMUST00000189568 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm29424-201ENSMUST00000189716 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm28599-201ENSMUST00000189838 694 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21867-201ENSMUST00000189917 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm29269-201ENSMUST00000190087 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21722-201ENSMUST00000190153 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm28423-201ENSMUST00000190701 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21899-201ENSMUST00000190745 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21910-201ENSMUST00000191163 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21849-201ENSMUST00000191571 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm28678-201ENSMUST00000191593 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm20910-201ENSMUST00000193268 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm21871-201ENSMUST00000194621 696 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 AA619741-201ENSMUST00000195095 646 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ska1Q9CPV1 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.88□□□□□ -0.35
Ska1Q9CPV1 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms