Protein–RNA interactions for Protein: Q99PV0

Prpf8, Pre-mRNA-processing-splicing factor 8, mousemouse

Known RBP Predictions only

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf8Q99PV0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm10327-201ENSMUST00000105222 1002 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm29741-201ENSMUST00000192667 421 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Erich1-201ENSMUST00000110813 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm13050-201ENSMUST00000122149 1345 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm8213-201ENSMUST00000118191 441 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Gm22331-201ENSMUST00000158066 136 ntBASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Tmem268-201ENSMUST00000077709 3765 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Prpf8Q99PV0 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 A330102I10Rik-202ENSMUST00000140415 682 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm16570-201ENSMUST00000161951 436 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm6091-201ENSMUST00000098307 165 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm12176-201ENSMUST00000121420 875 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 AC140451.2-201ENSMUST00000228030 664 ntBASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Prpf8Q99PV0 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Prpf8Q99PV0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 52.4 ms