Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 AA543401-201ENSMUST00000164248 1269 ntBASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm27631-201ENSMUST00000184163 466 ntBASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.39□□□□□ -0.27
Trim8Q99PJ2 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trim8Q99PJ2 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Ccdc42-203ENSMUST00000154294 1384 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gm26308-201ENSMUST00000157768 69 ntBASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Gm29741-201ENSMUST00000192667 421 ntBASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Mir125a-201ENSMUST00000083545 68 ntBASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim8Q99PJ2 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms