Protein–RNA interactions for Protein: Q99NB9

Sf3b1, Splicing factor 3B subunit 1, mousemouse

Known RBP Predictions only

Length 1,304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1Q99NB9 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm24196-201ENSMUST00000179161 110 ntBASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm43630-201ENSMUST00000201550 776 ntBASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Cracr2a-201ENSMUST00000071563 1094 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm6091-201ENSMUST00000098307 165 ntBASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Sf3b1Q99NB9 Gm13050-201ENSMUST00000122149 1345 ntBASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Gm28182-201ENSMUST00000188354 2477 ntBASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
Sf3b1Q99NB9 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Gm29649-201ENSMUST00000185649 419 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Gm45841-201ENSMUST00000207700 164 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Ntrk2-209ENSMUST00000225950 2640 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Sf3b1Q99NB9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms