Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.31□□□□□ -0.28
Msh4Q99MT2 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Msh4Q99MT2 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Gm12585-201ENSMUST00000117307 290 ntBASIC13.3□□□□□ -0.28
Msh4Q99MT2 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.3□□□□□ -0.28
Msh4Q99MT2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC13.3□□□□□ -0.28
Msh4Q99MT2 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Msh4Q99MT2 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Msh4Q99MT2 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm9347-201ENSMUST00000211473 1607 ntBASIC13.29□□□□□ -0.28
Msh4Q99MT2 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm44608-201ENSMUST00000206827 855 ntBASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Msh4Q99MT2 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Msh4Q99MT2 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.28□□□□□ -0.28
Msh4Q99MT2 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm7488-201ENSMUST00000117148 684 ntBASIC13.28□□□□□ -0.28
Msh4Q99MT2 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.28□□□□□ -0.28
Msh4Q99MT2 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.28□□□□□ -0.28
Msh4Q99MT2 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Msh4Q99MT2 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms