Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 1810043G02Rik-202ENSMUST00000105398 899 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Gm11964-201ENSMUST00000120982 444 ntBASIC16.74■□□□□ 0.27
RtcbQ99LF4 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Gm45339-201ENSMUST00000210823 877 ntTSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 CT030182.1-201ENSMUST00000225935 533 ntBASIC16.74■□□□□ 0.27
RtcbQ99LF4 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
RtcbQ99LF4 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Gm11222-201ENSMUST00000119005 738 ntBASIC16.73■□□□□ 0.27
RtcbQ99LF4 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC16.73■□□□□ 0.27
RtcbQ99LF4 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Rps4l-202ENSMUST00000204242 789 ntBASIC16.73■□□□□ 0.27
RtcbQ99LF4 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
RtcbQ99LF4 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC16.73■□□□□ 0.27
RtcbQ99LF4 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.72■□□□□ 0.27
RtcbQ99LF4 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm6447-201ENSMUST00000118905 835 ntBASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm26185-201ENSMUST00000157692 266 ntBASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm16505-201ENSMUST00000179981 232 ntBASIC16.72■□□□□ 0.27
RtcbQ99LF4 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm43138-201ENSMUST00000199123 708 ntBASIC16.72■□□□□ 0.27
RtcbQ99LF4 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
RtcbQ99LF4 Gm16425-201ENSMUST00000118143 3130 ntBASIC16.72■□□□□ 0.27
RtcbQ99LF4 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
RtcbQ99LF4 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
RtcbQ99LF4 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Nccrp1-201ENSMUST00000057974 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 AC154412.1-201ENSMUST00000226540 2786 ntBASIC16.71■□□□□ 0.27
RtcbQ99LF4 Gm12363-201ENSMUST00000122250 668 ntBASIC16.71■□□□□ 0.27
RtcbQ99LF4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
RtcbQ99LF4 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Gm4768-201ENSMUST00000206199 686 ntBASIC16.71■□□□□ 0.27
RtcbQ99LF4 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
RtcbQ99LF4 Gm5781-201ENSMUST00000219792 443 ntBASIC16.71■□□□□ 0.27
RtcbQ99LF4 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms