Protein–RNA interactions for Protein: Q99KU0

Vmp1, Vacuole membrane protein 1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1Q99KU0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gm12882-201ENSMUST00000121696 517 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Mir7684-201ENSMUST00000183858 60 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Mir8102-201ENSMUST00000184148 139 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gm27989-201ENSMUST00000184721 107 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gm46209-201ENSMUST00000217912 553 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gm9063-201ENSMUST00000223299 582 ntBASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Vmp1Q99KU0 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm12151-201ENSMUST00000121374 290 ntBASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Vmp1Q99KU0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Gm27321-201ENSMUST00000185021 205 ntBASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.17□□□□□ -0.3
Vmp1Q99KU0 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.17□□□□□ -0.3
Vmp1Q99KU0 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Vmp1Q99KU0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms