Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.74□□□□□ -0.21
Cdk9Q99J95 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.74□□□□□ -0.21
Cdk9Q99J95 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.73□□□□□ -0.21
Cdk9Q99J95 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 AC159295.1-201ENSMUST00000225326 940 ntBASIC13.73□□□□□ -0.21
Cdk9Q99J95 CT025555.1-201ENSMUST00000225901 1217 ntBASIC13.73□□□□□ -0.21
Cdk9Q99J95 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cdk9Q99J95 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cdk9Q99J95 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.73□□□□□ -0.21
Cdk9Q99J95 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Gm4995-201ENSMUST00000117247 432 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Gm2756-201ENSMUST00000195851 400 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 AC154572.2-201ENSMUST00000225105 997 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 AC225888.1-201ENSMUST00000227184 728 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.72□□□□□ -0.21
Cdk9Q99J95 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Cdk9Q99J95 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Cdk9Q99J95 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms