Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Gm14719-201ENSMUST00000121891 340 ntBASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Gm24694-201ENSMUST00000180054 110 ntBASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Gm27663-201ENSMUST00000184839 110 ntBASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pcdhb1Q91Y08 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Pcdhb1Q91Y08 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm3695-201ENSMUST00000087222 1009 ntBASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Pcdhb1Q91Y08 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Pcdhb1Q91Y08 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms