Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Pcdhga3Q91XY5 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Trappc12-201ENSMUST00000020954 3377 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gm14767-201ENSMUST00000121559 586 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gm27618-201ENSMUST00000183671 60 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gm37277-201ENSMUST00000194052 1111 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gm18027-201ENSMUST00000218947 619 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Pcdhga3Q91XY5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gm46209-201ENSMUST00000217912 553 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gm9229-201ENSMUST00000222777 126 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Gm37644-201ENSMUST00000192190 2270 ntBASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Eln-201ENSMUST00000015138 3853 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Pcdhga3Q91XY5 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms