Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Asxl1-205ENSMUST00000227428 6981 ntAPPRIS ALT2 BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Pcdhga4Q91XY4 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Gm9522-201ENSMUST00000182394 926 ntBASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Gm45630-201ENSMUST00000210243 1911 ntBASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Pcdhga4Q91XY4 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Gm37714-201ENSMUST00000194742 342 ntBASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.46□□□□□ -0.25
Pcdhga4Q91XY4 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Pcdhga4Q91XY4 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Gltpd2-202ENSMUST00000179000 794 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.45□□□□□ -0.26
Pcdhga4Q91XY4 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms