Protein–RNA interactions for Protein: Q8VEE4

Rpa1, Replication protein A 70 kDa DNA-binding subunit, mousemouse

Known RBP Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1Q8VEE4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.75□□□□□ -0.21
Rpa1Q8VEE4 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gm1401-201ENSMUST00000122048 772 ntBASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gm43930-201ENSMUST00000203868 845 ntBASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Rpa1Q8VEE4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 AC154222.1-201ENSMUST00000223882 475 ntBASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Paupar-201ENSMUST00000194826 3482 ntBASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Gm7049-201ENSMUST00000223520 1712 ntBASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Rpa1Q8VEE4 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Rpa1Q8VEE4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms