Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rprd1aQ8VDS4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm6745-201ENSMUST00000199216 526 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gm6180-201ENSMUST00000065243 498 ntBASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rprd1aQ8VDS4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Gm11524-201ENSMUST00000119349 807 ntBASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Gm19078-201ENSMUST00000206311 727 ntBASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rprd1aQ8VDS4 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rprd1aQ8VDS4 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms