Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Vps39Q8R5L3 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm13385-201ENSMUST00000121089 220 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm14767-201ENSMUST00000121559 586 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm43575-201ENSMUST00000196420 516 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.67□□□□□ -0.22
Vps39Q8R5L3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Vps39Q8R5L3 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm23935-201ENSMUST00000102303 57 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm24270-201ENSMUST00000102326 57 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm24245-201ENSMUST00000157318 57 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm22175-201ENSMUST00000175007 78 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm24420-201ENSMUST00000176676 59 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm5069-202ENSMUST00000192714 1011 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm10766-202ENSMUST00000194123 606 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm44344-201ENSMUST00000200287 129 ntBASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Sertad2-203ENSMUST00000109586 5515 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Vps39Q8R5L3 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Vps39Q8R5L3 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms