Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Top1mtQ8R4U6 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Top1mtQ8R4U6 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Top1mtQ8R4U6 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Top1mtQ8R4U6 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 AC139580.1-202ENSMUST00000223574 928 ntBASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Syt7-204ENSMUST00000223586 1344 ntBASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Gm9797-201ENSMUST00000052902 613 ntBASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Top1mtQ8R4U6 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 AC154621.1-201ENSMUST00000226155 1119 ntBASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Wdyhv1-203ENSMUST00000226889 394 ntBASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Top1mtQ8R4U6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Top1mtQ8R4U6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 AC154725.1-201ENSMUST00000224826 1961 ntBASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Top1mtQ8R4U6 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms