Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Gm44891-201ENSMUST00000208817 2223 ntBASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Gm18057-201ENSMUST00000208220 503 ntBASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nudcd3Q8R1N4 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Mir8117-201ENSMUST00000184773 107 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nudcd3Q8R1N4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nudcd3Q8R1N4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms