Protein–RNA interactions for Protein: Q8K4J2

Ebf4, Transcription factor COE4, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf4Q8K4J2 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Sema4a-202ENSMUST00000107531 2897 ntTSL 5 BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Ebf4Q8K4J2 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Pbld2-201ENSMUST00000020262 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Pak1-201ENSMUST00000033040 3065 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC12.41□□□□□ -0.42
Ebf4Q8K4J2 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gm9385-201ENSMUST00000117563 472 ntBASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gm27920-201ENSMUST00000183953 96 ntBASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gm29741-201ENSMUST00000192667 421 ntBASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.4□□□□□ -0.42
Ebf4Q8K4J2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf4Q8K4J2 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.4□□□□□ -0.43
Ebf4Q8K4J2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Ebf4Q8K4J2 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Ebf4Q8K4J2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms