Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Gm24694-201ENSMUST00000180054 110 ntBASIC12.88□□□□□ -0.35
Clrn1Q8K445 Gm27663-201ENSMUST00000184839 110 ntBASIC12.88□□□□□ -0.35
Clrn1Q8K445 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Wdyhv1-203ENSMUST00000226889 394 ntBASIC12.88□□□□□ -0.35
Clrn1Q8K445 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Clrn1Q8K445 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.87□□□□□ -0.35
Clrn1Q8K445 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC12.87□□□□□ -0.35
Clrn1Q8K445 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Gm18934-201ENSMUST00000216671 1044 ntBASIC12.87□□□□□ -0.35
Clrn1Q8K445 Gm9797-201ENSMUST00000052902 613 ntBASIC12.87□□□□□ -0.35
Clrn1Q8K445 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn1Q8K445 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 AC159649.2-201ENSMUST00000222984 3223 ntBASIC12.86□□□□□ -0.35
Clrn1Q8K445 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gm15240-201ENSMUST00000118156 720 ntBASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gm16215-201ENSMUST00000161990 637 ntBASIC12.86□□□□□ -0.35
Clrn1Q8K445 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gm21854-201ENSMUST00000179901 471 ntBASIC12.86□□□□□ -0.35
Clrn1Q8K445 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.86□□□□□ -0.35
Clrn1Q8K445 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn1Q8K445 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms