Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Brf1Q8CFK2 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm5354-201ENSMUST00000182417 973 ntBASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm19078-201ENSMUST00000206311 727 ntBASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm38577-201ENSMUST00000221531 4545 ntBASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
Brf1Q8CFK2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Brf1Q8CFK2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC16.46■□□□□ 0.22
Brf1Q8CFK2 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC16.46■□□□□ 0.22
Brf1Q8CFK2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Gm12859-201ENSMUST00000117834 427 ntBASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Gm12485-201ENSMUST00000119641 291 ntBASIC16.45■□□□□ 0.22
Brf1Q8CFK2 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Brf1Q8CFK2 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.44■□□□□ 0.22
Brf1Q8CFK2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Gm10729-202ENSMUST00000193403 1375 ntBASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC16.44■□□□□ 0.22
Brf1Q8CFK2 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms