Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Gm15376-201ENSMUST00000122258 783 ntBASIC14.37□□□□□ -0.11
Uba3Q8C878 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.37□□□□□ -0.11
Uba3Q8C878 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Uba3Q8C878 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.37□□□□□ -0.11
Uba3Q8C878 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm37917-201ENSMUST00000194711 392 ntBASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm19078-201ENSMUST00000206311 727 ntBASIC14.36□□□□□ -0.11
Uba3Q8C878 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.36□□□□□ -0.11
Uba3Q8C878 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Uba3Q8C878 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Uba3Q8C878 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Matn2-206ENSMUST00000228570 2798 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm15770-201ENSMUST00000117498 584 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm12485-201ENSMUST00000119641 291 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm12341-201ENSMUST00000119724 503 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.35□□□□□ -0.11
Uba3Q8C878 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Mir6392-201ENSMUST00000184924 108 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm44719-201ENSMUST00000206404 149 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm19220-201ENSMUST00000222682 803 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.35□□□□□ -0.11
Uba3Q8C878 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Uba3Q8C878 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms