Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm11946-201ENSMUST00000123459 3941 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm12957-201ENSMUST00000117835 377 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm14660-201ENSMUST00000119809 575 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm24644-201ENSMUST00000157114 139 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Itm2b-204ENSMUST00000228637 783 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Rn7sk-201ENSMUST00000083103 331 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Gm26315-201ENSMUST00000083890 321 ntBASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Sh3rf2Q8BZT2 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm5687-201ENSMUST00000118252 640 ntBASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm22331-201ENSMUST00000158066 136 ntBASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm8810-201ENSMUST00000172895 754 ntBASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Sh3rf2Q8BZT2 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Mir1938-201ENSMUST00000158746 100 ntBASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Proscos-202ENSMUST00000178990 666 ntBASIC13.78□□□□□ -0.2
Sh3rf2Q8BZT2 Gm45841-201ENSMUST00000207700 164 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms