Protein–RNA interactions for Protein: Q8BWU1

Sprn, Shadow of prion protein, mousemouse

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SprnQ8BWU1 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 AA619741-201ENSMUST00000195095 646 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Gm43125-201ENSMUST00000201724 730 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Gm44872-201ENSMUST00000207864 420 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 AC122840.1-201ENSMUST00000220915 3334 ntBASIC12.04□□□□□ -0.48
SprnQ8BWU1 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
SprnQ8BWU1 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Gm13823-201ENSMUST00000119930 345 ntBASIC12.03□□□□□ -0.48
SprnQ8BWU1 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 AA543401-201ENSMUST00000164248 1269 ntBASIC12.03□□□□□ -0.48
SprnQ8BWU1 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.03□□□□□ -0.48
SprnQ8BWU1 Eef1akmt2-201ENSMUST00000033257 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
SprnQ8BWU1 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.03□□□□□ -0.48
SprnQ8BWU1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SprnQ8BWU1 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SprnQ8BWU1 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SprnQ8BWU1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.02□□□□□ -0.49
SprnQ8BWU1 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SprnQ8BWU1 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms