Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Gm25948-201ENSMUST00000175334 112 ntBASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ccdc40Q8BI79 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm12428-201ENSMUST00000119844 727 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm6916-202ENSMUST00000205523 195 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Psap-203ENSMUST00000165878 2564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ccdc40Q8BI79 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Gm27533-201ENSMUST00000183800 152 ntBASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Gm37714-201ENSMUST00000194742 342 ntBASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 AC154767.3-201ENSMUST00000225150 1342 ntBASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ccdc40Q8BI79 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC14.27□□□□□ -0.12
Ccdc40Q8BI79 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51 ms