Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 AC124751.1-201ENSMUST00000222716 1408 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Clrn3Q8BHH8 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm29741-201ENSMUST00000192667 421 ntBASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm44719-201ENSMUST00000206404 149 ntBASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Clrn3Q8BHH8 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Paupar-201ENSMUST00000194826 3482 ntBASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm4780-202ENSMUST00000215200 2644 ntBASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm13223-201ENSMUST00000118609 747 ntBASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gm9063-201ENSMUST00000223299 582 ntBASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Clrn3Q8BHH8 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms