Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.3□□□□□ -0.28
Trim50Q810I2 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gm18905-201ENSMUST00000205454 928 ntBASIC13.3□□□□□ -0.28
Trim50Q810I2 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.3□□□□□ -0.28
Trim50Q810I2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Trim50Q810I2 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim50Q810I2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Gm19863-201ENSMUST00000192480 2218 ntBASIC13.29□□□□□ -0.28
Trim50Q810I2 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.29□□□□□ -0.28
Trim50Q810I2 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.29□□□□□ -0.28
Trim50Q810I2 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.29□□□□□ -0.28
Trim50Q810I2 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.29□□□□□ -0.28
Trim50Q810I2 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.29□□□□□ -0.28
Trim50Q810I2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trim50Q810I2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.28□□□□□ -0.28
Trim50Q810I2 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim50Q810I2 Gm17795-201ENSMUST00000214505 757 ntBASIC13.28□□□□□ -0.28
Trim50Q810I2 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.28□□□□□ -0.28
Trim50Q810I2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Trim50Q810I2 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.28□□□□□ -0.28
Trim50Q810I2 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Trim50Q810I2 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.28□□□□□ -0.28
Trim50Q810I2 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trim50Q810I2 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Trim50Q810I2 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.27□□□□□ -0.28
Trim50Q810I2 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC13.27□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms