Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm6407-201ENSMUST00000176468 549 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm45186-201ENSMUST00000206874 478 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm18893-201ENSMUST00000198416 943 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm5781-201ENSMUST00000219792 443 ntBASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Ttc28Q80XJ3 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm14017-201ENSMUST00000121934 386 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm24990-201ENSMUST00000157406 323 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm2260-201ENSMUST00000184965 657 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 AC123857.2-201ENSMUST00000225756 1582 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Selenot-ps-201ENSMUST00000119098 593 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm25732-201ENSMUST00000175168 60 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Ctrc-201ENSMUST00000037059 951 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm43423-201ENSMUST00000198390 2094 ntBASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Ttc28Q80XJ3 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Gm2231-201ENSMUST00000125661 612 ntBASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC11.36□□□□□ -0.59
Ttc28Q80XJ3 Gm27239-201ENSMUST00000184638 642 ntTSL 3 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms