Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm17420-201ENSMUST00000164753 153 ntBASIC13.03□□□□□ -0.32
Vrk1Q80X41 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm24196-201ENSMUST00000179161 110 ntBASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm45331-201ENSMUST00000209868 554 ntBASIC13.03□□□□□ -0.32
Vrk1Q80X41 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Gm10478-201ENSMUST00000084451 396 ntBASIC13.03□□□□□ -0.32
Vrk1Q80X41 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Vrk1Q80X41 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.02□□□□□ -0.32
Vrk1Q80X41 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Vrk1Q80X41 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm42693-201ENSMUST00000196779 631 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm42550-201ENSMUST00000201553 960 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 AC122459.1-201ENSMUST00000228373 885 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm5161-201ENSMUST00000075243 853 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Gm13050-201ENSMUST00000122149 1345 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.02□□□□□ -0.33
Vrk1Q80X41 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Vrk1Q80X41 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vrk1Q80X41 Gm24447-201ENSMUST00000083977 338 ntBASIC13.01□□□□□ -0.33
Vrk1Q80X41 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms