Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Gm24526-201ENSMUST00000082921 158 ntBASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Prpf40bQ80W14 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Rn7s1-201ENSMUST00000174924 300 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Rn7s2-201ENSMUST00000175032 300 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm26461-201ENSMUST00000175064 290 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm27514-201ENSMUST00000183692 110 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm43822-201ENSMUST00000200285 476 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm45880-201ENSMUST00000213041 853 ntBASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
Prpf40bQ80W14 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC15.72■□□□□ 0.11
Prpf40bQ80W14 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Prpf40bQ80W14 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm38102-201ENSMUST00000192791 1935 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm7584-201ENSMUST00000175829 940 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm4857-201ENSMUST00000192718 785 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm5425-201ENSMUST00000214125 459 ntBASIC15.71■□□□□ 0.11
Prpf40bQ80W14 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Prpf40bQ80W14 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms