Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Syt7-205ENSMUST00000224135 1557 ntBASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rpp38Q80UU2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm28386-201ENSMUST00000189147 1849 ntBASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 CT030684.3-201ENSMUST00000227308 2445 ntBASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rpp38Q80UU2 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm15678-201ENSMUST00000117573 960 ntBASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm4782-201ENSMUST00000168705 2046 ntBASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm2423-201ENSMUST00000074863 733 ntBASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rpp38Q80UU2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rpp38Q80UU2 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms